Pairwise_Sequence_Comparison

Compares a nucleotide query sequence translated in all reading frames against a protein sequence database and calculates the statistical significance of matches using the Basic Local Alignment Tool (BLAST).

$Rev: 20 $

Compares a protein sequence against a protein database and calculates the statistical significance of matches using the Basic Local Alignment Tool (BLAST).

$Rev: 20 $

Compares a nucleotide sequence to a nucleotide sequence database and calculates the statistical significance of matches using the Basic Local Alignment Search Tool (BLAST).

$Rev: 20 $

Compares a protein or dna sequence against a protein or dna database and calculates the statistical significance of matches using the Basic Local Alignment Tool (BLAST).

$Rev: 20 $

Compares a nucleotide sequence (it is translated with frameshifts and it allows frameshifts inside codons) against a protein database using the FASTA (fasty) algorithm.

$Rev: 20 $