PDB

The RCSB-PDB provides a number of different SOAP based web services. RESTful services are in preparation.

The CATH/Gene3D Database lookup service provides an interface that exposes the backend CATH/Gene3D databases to simple lookup queries. This enables users to quickly answers questions such as:

• return all the GO terms for a given CATH superfamily (PdbSuperfamily2GoTerms)
• return all the CATH domains for a given UniProt ID (UniProtId2DomainIds)

TOPCOMP

Interface to the TOPCOMP database. Returns a zip file with data on a given protein in the TOPCOMP-format.

Generate protein backbone and side chain co-ordinates from a C(alpha) trace in PDB format using the MaxSprout program.