EMBOSS fdiscboot

1780

Bootstrapped discrete sites algorithm

A description of the WSDL service:

fdiscbootService

Namespace: http://soaplab.ebi.ac.uk/phylogeny_molecular_sequence/fdiscboot

Bootstrapped discrete sites algorithm

Port: fdiscbootPort
Location: http://www.ebi.ac.uk:80/soaplab/typed/services/phylogeny_molecular_sequence.fdiscboot
Protocol: http://schemas.xmlsoap.org/soap/http
Default Style: document

starts a job and returns its job identifier

SOAP Action: run
Input Message: run
- run
  - run type appInputs
    - infile_direct_data type string
    - infile_url type string
    - mixfile_direct_data type string
    - mixfile_url type string
    - ancfile_direct_data type string
    - ancfile_url type string
    - weights_direct_data type string
    - weights_url type string
    - factorfile_direct_data type string
    - factorfile_url type string
    - test type
      - restriction type string
    - regular type boolean
    - fracsample type
      - restriction type float
    - morphseqtype type
      - restriction type string
    - blocksize type
      - restriction type long
    - reps type
      - restriction type long
    - justweights type
      - restriction type string
    - seed type
      - restriction type long
    - printdata type boolean
    - dotdiff type boolean
    - progress type boolean
Output Message: runResponse
- runResponse
  - runResponse type jobId
    - restriction type string

starts a job, waits until it is completed and returns the job results

SOAP Action: runAndWaitFor
Input Message: runAndWaitFor
- runAndWaitFor
  - runAndWaitFor type RunAndWaitFor
Output Message: runAndWaitForResponse
- runAndWaitForResponse
  - runAndWaitForResponse type appResults
    - report type string
    - detailed_status type long
    - outfile type string
    - outfile_url type string
    - outancfile type string
    - outancfile_url type string
    - outmixfile type string
    - outmixfile_url type string
    - outfactfile type string
    - outfactfile_url type string

returns status of a given job

SOAP Action: getStatus
Input Message: getStatus
- jobId
  - getStatus type getStatusRequest
    - jobId type jobId
      - restriction type string
Output Message: getStatusResponse
- jobStatus
  - getStatusResponse type jobStatus
    - restriction type string

terminates the specified job

SOAP Action: terminate
Input Message: terminateRequest
- jobId
  - terminate type terminateRequest
    - jobId type jobId
      - restriction type string

informs server that resources for the specified job can be cleared

SOAP Action: clear
Input Message: clearRequest
- jobId
  - clear type clearRequest
    - jobId type jobId
      - restriction type string

waits until the specified job terminates

SOAP Action: waitfor
Input Message: waitforRequest
- jobId
  - waitfor type waitforRequest
    - jobId type jobId
      - restriction type string

returns all results of a given job

SOAP Action: getResults
Input Message: getResults
- jobId
  - getResults type getResultsRequest
    - jobId type jobId
      - restriction type string
Output Message: getResultsResponse
- appResults
  - getResultsResponse type appResults
    - report type string
    - detailed_status type long
    - outfile type string
    - outfile_url type string
    - outancfile type string
    - outancfile_url type string
    - outmixfile type string
    - outmixfile_url type string
    - outfactfile type string
    - outfactfile_url type string

returns a structered description of the service, in xml

SOAP Action: describe
Input Message: describeRequest
- dummy-empty-part
  - describe type describeRequest
Output Message: describeResponse
- description
  - describeResponse type string

SOAP Action: getLastEvent
Input Message: getLastEventRequest
- jobId
  - getLastEvent type getLastEventRequest
    - jobId type jobId
      - restriction type string
Output Message: getLastEventResponse
- lastEvent
  - getLastEventResponse type string

SOAP Action: getResultsInfo
Input Message: getResultsInfo
- jobId
  - getResultsInfo type getResultsInfoRequest
    - jobId type jobId
      - restriction type string
Output Message: getResultsInfoResponse
- jobStatus
  - getResultsInfoResponse type getResultsInfoResponse
    - resultsInfoList type resultInfo
      - name type string
      - type type string
      - length type long
      - size type long

Date	Description of Changes
8th May 2009	First Snapshot
11th August 2009	Operation named run has changed action to: run Operation named runAndWaitFor has changed action to: runAndWaitFor An operation named getStatus has been added. An operation named terminate has been added. An operation named clear has been added. An operation named waitfor has been added. An operation named getResults has been added. An operation named describe has been added. An operation named getLastEvent has been added. An operation named getResultsInfo has been added.

derived from EMBOSS QA tests

Submitted by soaplab on Thu, 05/07/2009 - 10:47