EMBOSS fseqbootall

PASSED

Bootstrapped sequences algorithm

A description of the WSDL service:

fseqbootallService

Namespace: http://soaplab.ebi.ac.uk/phylogeny_molecular_sequence/fseqbootall

Bootstrapped sequences algorithm


  • Port: fseqbootallPort
  • Location: http://www.ebi.ac.uk:80/soaplab/typed/services/phylogeny_molecular_sequence.fseqbootall
  • Protocol: http://schemas.xmlsoap.org/soap/http
  • Default Style: document

Operations

run

starts a job and returns its job identifier

  • SOAP Action: run
  • Input Message: run
    • run
      • run type appInputs
        • infilesequences type sequenceInput
          • direct_data type string
            • usa type string
              • sformat type SequenceFormat
                • restriction type string
                • sbegin type long
                  • send type long
                    • sprotein type boolean
                      • snucleotide type boolean
                        • sreverse type boolean
                          • slower type boolean
                            • supper type boolean
                            • categories_direct_data type string
                              • categories_url type string
                                • mixfile_direct_data type string
                                  • mixfile_url type string
                                    • ancfile_direct_data type string
                                      • ancfile_url type string
                                        • weights_direct_data type string
                                          • weights_url type string
                                            • factorfile_direct_data type string
                                              • factorfile_url type string
                                                • datatype type
                                                  • restriction type string
                                                  • test type
                                                    • restriction type string
                                                    • regular type boolean
                                                      • fracsample type
                                                        • restriction type float
                                                        • rewriteformat type
                                                          • restriction type string
                                                          • seqtype type
                                                            • restriction type string
                                                            • morphseqtype type
                                                              • restriction type string
                                                              • blocksize type
                                                                • restriction type long
                                                                • reps type
                                                                  • restriction type long
                                                                  • justweights type
                                                                    • restriction type string
                                                                    • enzymes type boolean
                                                                      • all type boolean
                                                                        • seed type
                                                                          • restriction type long
                                                                          • printdata type boolean
                                                                            • dotdiff type boolean
                                                                              • progress type boolean
                                                                          • Output Message: runResponse
                                                                            • runResponse
                                                                              • runResponse type jobId
                                                                                • restriction type string

                                                                            runAndWaitFor

                                                                            starts a job, waits until it is completed and returns the job results

                                                                            • SOAP Action: runAndWaitFor
                                                                            • Input Message: runAndWaitFor
                                                                              • runAndWaitFor
                                                                                • runAndWaitFor type RunAndWaitFor
                                                                              • Output Message: runAndWaitForResponse
                                                                                • runAndWaitForResponse
                                                                                  • runAndWaitForResponse type appResults
                                                                                    • report type string
                                                                                      • detailed_status type long
                                                                                        • outfile type string
                                                                                          • outfile_url type string

                                                                                      getStatus

                                                                                      returns status of a given job

                                                                                      • SOAP Action: getStatus
                                                                                      • Input Message: getStatus
                                                                                        • jobId
                                                                                          • getStatus type getStatusRequest
                                                                                            • jobId type jobId
                                                                                              • restriction type string
                                                                                        • Output Message: getStatusResponse
                                                                                          • jobStatus
                                                                                            • getStatusResponse type jobStatus
                                                                                              • restriction type string

                                                                                          terminate

                                                                                          terminates the specified job

                                                                                          • SOAP Action: terminate
                                                                                          • Input Message: terminateRequest
                                                                                            • jobId
                                                                                              • terminate type terminateRequest
                                                                                                • jobId type jobId
                                                                                                  • restriction type string

                                                                                            clear

                                                                                            informs server that resources for the specified job can be cleared

                                                                                            • SOAP Action: clear
                                                                                            • Input Message: clearRequest
                                                                                              • jobId
                                                                                                • clear type clearRequest
                                                                                                  • jobId type jobId
                                                                                                    • restriction type string

                                                                                              waitfor

                                                                                              waits until the specified job terminates

                                                                                              • SOAP Action: waitfor
                                                                                              • Input Message: waitforRequest
                                                                                                • jobId
                                                                                                  • waitfor type waitforRequest
                                                                                                    • jobId type jobId
                                                                                                      • restriction type string

                                                                                                getResults

                                                                                                returns all results of a given job

                                                                                                • SOAP Action: getResults
                                                                                                • Input Message: getResults
                                                                                                  • jobId
                                                                                                    • getResults type getResultsRequest
                                                                                                      • jobId type jobId
                                                                                                        • restriction type string
                                                                                                  • Output Message: getResultsResponse
                                                                                                    • appResults
                                                                                                      • getResultsResponse type appResults
                                                                                                        • report type string
                                                                                                          • detailed_status type long
                                                                                                            • outfile type string
                                                                                                              • outfile_url type string

                                                                                                          describe

                                                                                                          returns a structered description of the service, in xml

                                                                                                          • SOAP Action: describe
                                                                                                          • Input Message: describeRequest
                                                                                                            • dummy-empty-part
                                                                                                              • describe type describeRequest
                                                                                                            • Output Message: describeResponse
                                                                                                              • description
                                                                                                                • describeResponse type string

                                                                                                              getLastEvent

                                                                                                              • SOAP Action: getLastEvent
                                                                                                              • Input Message: getLastEventRequest
                                                                                                                • jobId
                                                                                                                  • getLastEvent type getLastEventRequest
                                                                                                                    • jobId type jobId
                                                                                                                      • restriction type string
                                                                                                                • Output Message: getLastEventResponse
                                                                                                                  • lastEvent
                                                                                                                    • getLastEventResponse type string

                                                                                                                  getResultsInfo

                                                                                                                  • SOAP Action: getResultsInfo
                                                                                                                  • Input Message: getResultsInfo
                                                                                                                    • jobId
                                                                                                                      • getResultsInfo type getResultsInfoRequest
                                                                                                                        • jobId type jobId
                                                                                                                          • restriction type string
                                                                                                                    • Output Message: getResultsInfoResponse
                                                                                                                      • jobStatus
                                                                                                                        • getResultsInfoResponse type getResultsInfoResponse
                                                                                                                          • resultsInfoList type resultInfo
                                                                                                                            • name type string
                                                                                                                              • type type string
                                                                                                                                • length type long
                                                                                                                                  • size type long

                                                                                                                            WSDL Changes

                                                                                                                            DateDescription of Changes
                                                                                                                            8th May 2009First Snapshot
                                                                                                                            11th August 2009Operation named run has changed action to: run
                                                                                                                            Operation named runAndWaitFor has changed action to: runAndWaitFor
                                                                                                                            An operation named getStatus has been added.
                                                                                                                            An operation named terminate has been added.
                                                                                                                            An operation named clear has been added.
                                                                                                                            An operation named waitfor has been added.
                                                                                                                            An operation named getResults has been added.
                                                                                                                            An operation named describe has been added.
                                                                                                                            An operation named getLastEvent has been added.
                                                                                                                            An operation named getResultsInfo has been added.
                                                                                                                            PASSED

                                                                                                                            Test #1: test1

                                                                                                                            derived from EMBOSS QA tests