FuncNet

202

Service version1.1

WSDL URLhttp://funcnet.eu/soap/FrontEnd.wsdl PASSED

FuncNet is a distributed protein function comparison pipeline, funded by the European Union's EMBRACE Network of Excellence.

The objective of FuncNet is to provide an open platform for the computational prediction and analysis of protein function.

It is designed to answer questions like:

Given one set of proteins which are known to share a particular biological function...

... which of these other proteins also share that function?

This service allows you to submit requests to the FuncNet pipeline, which are then forwarded on to the component prediction services.

For a guide to using FuncNet, including source code and example SOAP messages, please see http://funcnet.eu/getting-started/

The individual prediction services within FuncNet are also available for direct querying; for details, please see http://funcnet.eu/wsdls/

A description of the WSDL service:

FrontEndService

Namespace: http://funcnet.eu/FuncNet_1_1/

Port: FrontEndPort
Location: http://funcnet.eu/frontend-war/services/FrontEndService
Protocol: http://schemas.xmlsoap.org/soap/http
Default Style: document

Operations

SubmitTwoProteinSets

SOAP Action: http://funcnet.eu/FuncNet_1_1/FrontEnd/SubmitTwoProteinSets
Input Message: SubmitTwoProteinSetsRequest
- parameters
  - SubmitTwoProteinSets type
    - queryProteins type ProteinList
      - p type string
    - refProteins type ProteinList
      - p type string
    - emailAddress type string
    - enableEmailNotify type boolean
Output Message: SubmitTwoProteinSetsResponse
- parameters
  - SubmitTwoProteinSetsResponse type
    - jobID type string

MonitorJob

SOAP Action: http://funcnet.eu/FuncNet_1_1/FrontEnd/MonitorJob
Input Message: MonitorJobRequest
- parameters
  - MonitorJob type
    - jobLocator type JobLocator
      - jobID type string
      - emailAddress type string
Output Message: MonitorJobResponse
- parameters
  - MonitorJobResponse type
    - status type string
    - predictorStatus type PredictorStatus
      - predictor type string
      - status type string

CancelJob

SOAP Action: http://funcnet.eu/FuncNet_1_1/FrontEnd/CancelJob
Input Message: CancelJobRequest
- parameters
  - CancelJob type
    - jobLocator type JobLocator
      - jobID type string
      - emailAddress type string
Output Message: CancelJobResponse
- parameters
  - CancelJobResponse type
    - status type string

RetrievePairwiseScores

SOAP Action: http://funcnet.eu/FuncNet_1_1/FrontEnd/RetrievePairwiseScores
Input Message: RetrievePairwiseScoresRequest
- parameters
  - RetrievePairwiseScores type
    - jobLocator type JobLocator
      - jobID type string
      - emailAddress type string
Output Message: RetrievePairwiseScoresResponse
- parameters
  - RetrievePairwiseScoresResponse type
    - comments type string
    - predictorStatus type PredictorStatus
      - predictor type string
      - status type string
    - s type PairwiseScore
      - p1 type string
      - p2 type string
      - rs type double
      - pv type double

RetrieveCompleteScores

SOAP Action: http://funcnet.eu/FuncNet_1_1/FrontEnd/RetrieveCompleteScores
Input Message: RetrieveCompleteScoresRequest
- parameters
  - RetrieveCompleteScores type
    - jobLocator type JobLocator
      - jobID type string
      - emailAddress type string
Output Message: RetrieveCompleteScoresResponse
- parameters
  - RetrieveCompleteScoresResponse type
    - comments type string
    - predictorStatus type PredictorStatus
      - predictor type string
      - status type string
    - s type ScoreProfile
      - p1 type string
      - p2 type string
      - rs type double
      - pv type double
      - pr type
        rs type double
        pv type double
      - rs type double
      - pv type double

WSDL Changes

Date	Description of Changes
8th April 2009	First Snapshot

Test #1: FuncNet simple test

This test script actually just queries the last results of the same monitoring program we use to populate the online status page at

http://funcnet.eu/current-status/

and returns a success, warning or error value appropriately. If the last test was performed more than half an hour ago, a warning is raised even if it passed.

Submitted by andrew.clegg on Wed, 11/19/2008 - 17:53