GOR I protein secondary structure prediction (CNRS IBCP)

FAILED
268
Contributor URLhttp://gbio-pbil.ibcp.fr/ws
WSDL URLhttp://gbio-pbil.ibcp.fr/media/wsdl/GorIWS.wsdlFAILED Show/Hide Details

GOR1 (GARNIER OSGUTHORPE and ROBSON) is a secondary structure prediction method based on the information theory. Scores for 4 conformational states are computed on a sliding window of 17 residues. These scores are corrected by decision constants and the highest one gives the conformational state for the residue in the center of the window (9th position).

A description of the WSDL service:

GorI_Service

Namespace: http://gbio.ibcp.fr:8090/GorI_Service

GorI @ IBCP (http://gbio-pbil.ibcp.fr)

  • Port: GorIPort
  • Location: http://gbio.ibcp.fr:8090/GorI_Service
  • Protocol: http://schemas.xmlsoap.org/soap/http
  • Default Style: rpc

Operations

submitGorI

Submit a sequence an get a jobID

  • SOAP Action: urn:GorIWS.wsdl#submitGorI
  • Input Message: submitGorIRequest
    • Sequence
      • string
  • Output Message: submitGorIResponse
    • JobId
      • string

checkStatusGorI

Submit a jobID and get the status

  • SOAP Action: urn:GorIWS.wsdl#checkStatusGorI
  • Input Message: checkStatusGorIRequest
    • JobId
      • string
  • Output Message: checkStatusGorIResponse
    • Status
      • string

getResultsGorI

>When job is finish, submit a jobid and get the results

  • SOAP Action: urn:GorIWS.wsdl#getResultsGorI
  • Input Message: getResultsGorIRequest
    • JobId
      • string
  • Output Message: getResultsGorIResponse
    • SecStructure
      • string

cancelGorI

When some thing is wrong, cancel your job

  • SOAP Action: urn:GorIWS.wsdl#cancelGorI
  • Input Message: cancelGorIRequest
    • JobId
      • string
  • Output Message: cancelGorIResponse
    • Status
      • string

WSDL Changes

DateDescription of Changes
8th April 2009First Snapshot
FAILED

Test #1: Functional test

Submitted by cblanchet on Thu, 01/15/2009 - 15:32
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