GOR III protein secondary structure prediction (CNRS IBCP)

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Contributor URLhttp://gbio-pbil.ibcp.fr/ws
WSDL URLhttp://gbio-pbil.ibcp.fr/media/wsdl/GorIIIWS.wsdlFAILED Show/Hide Details

GOR3 is the third improvement of GOR secondary structure prediction method based on the information theory. In GOR3, pair information is used instead of directional information as in GOR1 and GOR2. Scores are computed only for 3 conformational states.

A description of the WSDL service:

GorIII_Service

Namespace: http://gbio.ibcp.fr:8090/GorIII_Service

GorIII @ IBCP (http://gbio-pbil.ibcp.fr)

  • Port: GorIIIPort
  • Location: http://gbio.ibcp.fr:8090/GorIII_Service
  • Protocol: http://schemas.xmlsoap.org/soap/http
  • Default Style: rpc

Operations

submitGorIII

Submit a sequence an get a jobID

  • SOAP Action: urn:GorIIIWS.wsdl#submitGorIII
  • Input Message: submitGorIIIRequest
    • Sequence
      • string
  • Output Message: submitGorIIIResponse
    • JobId
      • string

checkStatusGorIII

Submit a jobID and get the status

  • SOAP Action: urn:GorIIIWS.wsdl#checkStatusGorIII
  • Input Message: checkStatusGorIIIRequest
    • JobId
      • string
  • Output Message: checkStatusGorIIIResponse
    • Status
      • string

getResultsGorIII

When job is finish, submit a jobid and get the results

  • SOAP Action: urn:GorIIIWS.wsdl#getResultsGorIII
  • Input Message: getResultsGorIIIRequest
    • JobId
      • string
  • Output Message: getResultsGorIIIResponse
    • SecStructure
      • string

cancelGorIII

When some thing is wrong, cancel your job

  • SOAP Action: urn:GorIIIWS.wsdl#cancelGorIII
  • Input Message: cancelGorIIIRequest
    • JobId
      • string
  • Output Message: cancelGorIIIResponse
    • Status
      • string

WSDL Changes

DateDescription of Changes
8th April 2009First Snapshot
PASSED

Test #1: Functional test

Submitted by cblanchet on Thu, 01/15/2009 - 15:33
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