tBLASTx at SIB (nucleotide query sequence(s) against a nucleotide sequence dabase, both six-frame translated)

Service version0.9.8 beta

Contributor URLhttp://ch.embnet.org/software/aBLAST.html

WSDL URLhttp://wsembnet.vital-it.ch/soaplab2/services/embnet.tblastx?wsdl FAILED

tBLASTx finds regions of similarity between the six-frame translations of a nucleotide query sequence and the six-frame translations of a nucleotide sequence database.
Computations are done on the Vital-IT cluster (SIB).
Most NCBI BLAST (2.2.17) options are available.
Most SIB databases are available: STS, EST, HTG, refseq, repbase, ...

INPUT: nucleotide sequence(s) + choose a database
OUTPUT: BLAST output

WSDL Changes

Date	Description of Changes
8th April 2009	First Snapshot

Submitted by smoretti on Tue, 11/04/2008 - 12:05

blast
DNA sequence
e-value
EMBRACE
evalue
NCBI
nucleotide
pairwise alignment
search
SIB
Similarity