WSx3DEM

1842

Service version1.04.20070413

Contributor URLhttp://biocomp.cnb.csic.es/VisualOmics/

WSDL URLhttp://biocomp.cnb.csic.es:8092/axis2/services/WSx3DEM?wsdl FAILED

Available services:
# WSx3DEM - The starting point. Function dsn returns a list of available Web Services (data sources).
# WSx3DEM_Reference - Reference server for 3D-EM volume map data from EMDB.
# WSx3DEM_Fitting - Alignment server based on hybrid models (PDB structures fitted into 3D-EM volumes).
# WSx3DEM_EMDB - Annotation server for 3D-EM volume maps.

WSx3DEM uses a client-server pattern to provide the structural 3D models maintained at the Electron Microscopy DataBase (EMDB) together with their related information (annotations).

This way, the 3D-EM models are the reference data where annotations are located representing the known features for a particular macromolecule. Accessing other biological entities is also possible as far as a relation between coordinate systems exists, serving as an alignment method.

This is a first implementation (using Axis2) translating the REST services into SOAP-RPC services.

A description of the WSDL service:

WSx3DEM

Namespace: http://wsx3dem/axis/bcu/cnb/csic/es/

Port: WSx3DEMSOAP11port_http
Location: http://localhost:8080/axis2/services/WSx3DEM
Protocol: http://schemas.xmlsoap.org/soap/http
Default Style: document

Operations

getVersion

SOAP Action: urn:getVersion
Input Message: getVersionRequest
Output Message: getVersionResponse
- parameters
  - getVersionResponse type
    - return type string

dsn

SOAP Action: urn:dsn
Input Message: dsnRequest
Output Message: dsnResponse
- parameters
  - dsnResponse type
    - return type string

Port: WSx3DEMSOAP12port_http
Location: http://localhost:8080/axis2/services/WSx3DEM
Protocol: http://schemas.xmlsoap.org/soap/http
Default Style: document

Operations

getVersion

SOAP Action: urn:getVersion
Input Message: getVersionRequest
Output Message: getVersionResponse
- parameters
  - getVersionResponse type
    - return type string

dsn

SOAP Action: urn:dsn
Input Message: dsnRequest
Output Message: dsnResponse
- parameters
  - dsnResponse type
    - return type string

Port: WSx3DEMHttpport
Location: http://localhost:8080/axis2/services/WSx3DEM
Protocol:
Default Style:

Operations

getVersion

SOAP Action:
Input Message: getVersionRequest
Output Message: getVersionResponse
- parameters
  - getVersionResponse type
    - return type string

dsn

SOAP Action:
Input Message: dsnRequest
Output Message: dsnResponse
- parameters
  - dsnResponse type
    - return type string

WSDL Changes

Date	Description of Changes
11th May 2009	First Snapshot

Test #1: WSx3DEM_dsn_test

##################################################
### Testing script for WSx3DEM services
### registered at http://www.embraceregistry.net/
###
### author: jrmacias@cnb.csic.es
### date: 20090511
###
### Simply make a dsn query to the Web Service and
### wait for proper response. It evaluates success
### just if the name of the services are found in
### the response
###################################################

Test #2: WSx3DEM_getVersion_test

###################################################
### Testing script for WSx3DEM services
### registered at http://www.embraceregistry.net/
###
### author: jrmacias@cnb.csic.es
### date: 20090511
###
### Simply make a getVersion query to the Web Service and
### wait for proper response. It evaluates success
### just if the name of the services are found in
### the response
###################################################

Submitted by jrmacias on Sun, 05/10/2009 - 23:21