molecular structure

WHAT-IF Web Services, see http://swift.cmbi.ru.nl/whatif and http://wiws.cmbi.ru.nl/help for more information.

WSx3DEM_EMDB - Annotation server for 3D-EM volume maps.

WSx3DEM_Reference uses a client-server pattern to provide the structural 3D models maintained at the Electron Microscopy DataBase (EMDB). The 3D-EM models are the reference data where annotations are located representing the known features for a particular macromolecule. Accessing other biological entities is also possible as far as a relation between coordinate systems exists, serving as an alignment method.

This is a first implementation (using Axis2) translating the REST services into SOAP-RPC services.

WSx3DEM_Fitting - Alignment server based on hybrid models (PDB structures fitted into 3D-EM volumes).

WSx3DEM_Reference uses a client-server pattern to provide the structural 3D models maintained at the Electron Microscopy DataBase (EMDB). The 3D-EM models are the reference data where annotations are located representing the known features for a particular macromolecule. Accessing other biological entities is also possible as far as a relation between coordinate systems exists, serving as an alignment method.

WSx3DEM_Reference - Reference server for 3D-EM volume map data from EMDB.

WSx3DEM_Reference uses a client-server pattern to provide the structural 3D models maintained at the Electron Microscopy DataBase (EMDB). The 3D-EM models are the reference data where annotations are located representing the known features for a particular macromolecule. Accessing other biological entities is also possible as far as a relation between coordinate systems exists, serving as an alignment method.

This is a first implementation (using Axis2) translating the REST services into SOAP-RPC services.

Available services:
# WSx3DEM - The starting point. Function dsn returns a list of available Web Services (data sources).
# WSx3DEM_Reference - Reference server for 3D-EM volume map data from EMDB.
# WSx3DEM_Fitting - Alignment server based on hybrid models (PDB structures fitted into 3D-EM volumes).
# WSx3DEM_EMDB - Annotation server for 3D-EM volume maps.

WSx3DEM uses a client-server pattern to provide the structural 3D models maintained at the Electron Microscopy DataBase (EMDB) together with their related information (annotations).