Other

ProdomCG_tree is a set of webservices allowing to browse ProDom-CG267 phylogenetic tree. It includes

• NearestNodeProdom : takes an NCBI taxID and returns the closest taxID present in ProdomCG
• GetParentProdom : takes a taxID present in ProdomCG and returns its parent
• GetChildProdom : takes a taxID present in ProdomCG and returns its child(ren)
• GetDFStreeProdom : returns the list of all the taxIDs present in ProdomCG in DFS order

Hogenom_tree is a set of webservices allowing to browse Hogenom 4 phylogenetic tree. It includes

• NearestNodeHogenom : takes an NCBI taxID and returns the closest taxID present in Hogenom
• GetParentHogenom : takes a taxID present in Hogenom and returns its parent
• GetChildHogenom : takes a taxID present in Hogenom and returns its child(ren)
• GetDFStreeHogenom : returns the list of all the taxIDs present in Hogenom in DFS order

WSxVO_BAMS_Features - Annotations for rat brain gene expression from BAMS

Visual Genomics:

The first part of the project is based on the Edinburgh Mouse Atlas Project (EMAP). This project has been working for more than a decade in the creation of a digital atlas of mouse development and a database that spatially maps in situ gene expression (EMAGE database). Visual Genomics project tries to bring together the multidimensional imaging and the genomics fields to provide an integrated system.

WSxVO_MTB_Features - Annotations for MTB mouse tumor database

Visual Genomics:

The first part of the project is based on the Edinburgh Mouse Atlas Project (EMAP). This project has been working for more than a decade in the creation of a digital atlas of mouse development and a database that spatially maps in situ gene expression (EMAGE database). Visual Genomics project tries to bring together the multidimensional imaging and the genomics fields to provide an integrated system.