RNA sequence

GetEntry -- Data retrieval by accession numbers etc -- (DDBJ)

As yet this is untested.

 

Service Description
"getentry" provides an easy way to retrieve entries from various databases at DDBJ.
Please see also the page in detail.
Submitted by DDBJ on Wed, 02/25/2009 - 06:09
»

GenomeMatrix

PASSED

GenomeMatrix integrates information from diverse experimental data resources for different organisms with respect to user-defined groups of Ensembl genes.

Submitted by MPIMG_bioinf on Mon, 11/17/2008 - 20:59
»

WSFasta

As yet this is untested.

Sequence similarity search using the FASTA suite:

  • FASTA - protein vs. protein database and nucleotide vs. nucleotide database
  • FASTF - mixed peptides vs. protein database
  • FASTS - short peptides vs. protein database
  • FASTX - nucleotide vs. protein database
  • FASTY - nucleotide vs. protein database
  • SSEARCH - protein vs. protein database using Smith-Waterman
  • TFASTX - protein vs. nucleotide database
  • TFASTY - protein vs. nucleotide database
Submitted by Hamish McWilliam on Fri, 11/14/2008 - 13:05
»

RNAmmer

PASSED

The RNAmmer 1.2 server predicts 5s/8s, 16s/18s, and 23s/28s ribosomal RNA in full genome sequences. This page is the entry of the CBS Prediction Server for RNAmmer. RNAmmer is available also as a Web Service described by the following WSDL file. Please read the instructions on the RNAmmer Web Services section.
This pages allows academic users to download RNAmmer

Submitted by pfhallin on Fri, 09/19/2008 - 10:35
»