engineDB_06_08 _test
This is a test of the engineDB_06_08 service.
Test filesDownload the files for this test
Test runRun test now
Support reference#214-1641
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view log 1 week agoPASSED
Test began: 2012-05-11 22:57:28
Test ended: 2012-05-11 22:57:44
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 2 weeks agoPASSED
Test began: 2012-05-04 15:20:35
Test ended: 2012-05-04 15:20:36
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 3 weeks agoPASSED
Test began: 2012-04-25 01:04:10
Test ended: 2012-04-25 01:04:11
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 4 weeks agoPASSED
Test began: 2012-04-20 21:18:32
Test ended: 2012-04-20 21:18:48
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 1 month agoPASSED
Test began: 2012-04-18 07:52:14
Test ended: 2012-04-18 07:52:30
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 1 month agoPASSED
Test began: 2012-04-15 21:10:51
Test ended: 2012-04-15 21:10:52
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 1 month agoPASSED
Test began: 2012-04-12 14:37:37
Test ended: 2012-04-12 14:37:53
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 1 month agoPASSED
Test began: 2012-04-11 23:08:55
Test ended: 2012-04-11 23:09:11
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 1 month agoPASSED
Test began: 2012-04-11 07:37:54
Test ended: 2012-04-11 07:37:55
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...view log 2 months agoPASSED
Test began: 2012-04-01 20:00:01
Test ended: 2012-04-01 20:00:02
Result : Test passed
------ stderr and stdout follow ------
got: XML::Compile::WSDL11=HASH(0xa3da78) at ./funcnet_test_engineDB.pl line 30.
$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ); at ./funcnet_test_engineDB.pl line 36.
Prot 1 Prot 2 P-value
P04637 P67939 0.000197228
P04637 O36006 0.000197228
P10415 O02718 0.000624465
P10415 Q7KJ42 0.0449135
Download this log...This test consists of the following files:
funcnet_test_engineDB.pl
#!/usr/bin/perl -w
# Really really simple demonstration script for FuncNet predictors (in this case GECO).
# This downloads and parses the WSDL, submits a job (two lists of proteins, query and
# reference) and prints out the results.
#
# Using this script for a different predictor requires you to change the URL, port,
# service and binding strings.
use strict;
use warnings;
use Data::Dumper;
use LWP::UserAgent;
use XML::Compile::WSDL11;
use XML::Compile::Transport::SOAPHTTP;
use XML::Compile::Schema;
my $ua = LWP::UserAgent->new;
my $wsdl_url = "http://spank.ba.itb.cnr.it/docs/engineDB_06_08.wsdl";
my $response = $ua->get( $wsdl_url );
unless( $response->is_success )
{
warn "Could not retrieve $wsdl_url: ", $response->status_line, "\n";
exit 1;
}
my $wsdl = XML::Compile::WSDL11->new( $response->content );
warn "got: $wsdl";
#my @op_defs = $wsdl->operations();
# warn "operations: ", join (", ", Dumper( @op_defs ) );
warn "\$wsdl->compileClient( '{http://funcnet.eu/FuncNet_1_0/}engineDBService' );";
my $op = $wsdl->operation(
operation => 'ScorePairwiseRelations',
port => 'engineDBPort',
service => '{http://funcnet.eu/FuncNet_1_0/}engineDBService' ,
binding => '{http://funcnet.eu/FuncNet_1_0/}engineDBBinding'
);
my $op_call = $op->compileClient();
# proteins1 is query set, proteins2 is reference set
my $parameters = {
proteins1 => { p => [ 'P04637', 'P10415' ] },
proteins2 => { p => [ 'P67939', 'O36006', 'O02718' , 'Q7KJ42'] }
};
my ( $answer, $trace ) = $op_call->( parameters => $parameters );
# warn Dumper( $trace );
# warn "Answer:", Dumper( $answer->{ parameters } );
print "Prot 1\tProt 2\tP-value\n";
foreach my $result ( @{ $answer->{ parameters }->{ s } } )
{
print $result->{ p1 } . "\t" . $result->{ p2 } . "\t" . $result->{ pv } . "\n";
}»
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